Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Srrm4Q8BKA3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Srrm4Q8BKA3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Srrm4Q8BKA3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Srrm4Q8BKA3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Srrm4Q8BKA3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Srrm4Q8BKA3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Srrm4Q8BKA3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.64□□□□□ -0.39
Srrm4Q8BKA3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Rprl2-201ENSMUST00000157150 290 ntBASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm26308-201ENSMUST00000157768 69 ntBASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm18057-201ENSMUST00000208220 503 ntBASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Srrm4Q8BKA3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms