Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf38Q8BI21 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf38Q8BI21 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf38Q8BI21 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf38Q8BI21 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf38Q8BI21 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf38Q8BI21 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rnf38Q8BI21 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.08□□□□□ -0.16
Rnf38Q8BI21 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf38Q8BI21 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gm7787-201ENSMUST00000216858 688 ntBASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rnf38Q8BI21 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms