Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Gm17271-201ENSMUST00000165535 355 ntBASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Samm50Q8BGH2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.1■□□□□ 0.33
Samm50Q8BGH2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC17.1■□□□□ 0.33
Samm50Q8BGH2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Gm13597-201ENSMUST00000121239 375 ntBASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.09■□□□□ 0.33
Samm50Q8BGH2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Samm50Q8BGH2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Samm50Q8BGH2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.08■□□□□ 0.32
Samm50Q8BGH2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.08■□□□□ 0.32
Samm50Q8BGH2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.07■□□□□ 0.32
Samm50Q8BGH2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms