Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim50Q810I2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim50Q810I2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim50Q810I2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim50Q810I2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim50Q810I2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim50Q810I2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim50Q810I2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.18□□□□□ -0.14
Trim50Q810I2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim50Q810I2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trim50Q810I2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.18□□□□□ -0.14
Trim50Q810I2 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.18□□□□□ -0.14
Trim50Q810I2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Trim50Q810I2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim50Q810I2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.18□□□□□ -0.14
Trim50Q810I2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim50Q810I2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.17□□□□□ -0.14
Trim50Q810I2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Gm37935-201ENSMUST00000192012 982 ntBASIC14.17□□□□□ -0.14
Trim50Q810I2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.17□□□□□ -0.14
Trim50Q810I2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.17□□□□□ -0.14
Trim50Q810I2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms