Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf40bQ80W14 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Gm15321-201ENSMUST00000121290 288 ntBASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Gm44344-201ENSMUST00000200287 129 ntBASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf40bQ80W14 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm14722-201ENSMUST00000118943 689 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm27680-201ENSMUST00000184192 160 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm18766-201ENSMUST00000189811 808 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm6180-201ENSMUST00000065243 498 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Efs-202ENSMUST00000227037 2540 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf40bQ80W14 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Gm15483-201ENSMUST00000120338 456 ntBASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Gm12138-201ENSMUST00000122180 951 ntBASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Gm44719-201ENSMUST00000206404 149 ntBASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.79■□□□□ 0.28
Prpf40bQ80W14 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm16026-204ENSMUST00000162652 683 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms