Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ush1gQ80T11 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Gm14127-201ENSMUST00000117906 678 ntBASIC15.94■□□□□ 0.14
Ush1gQ80T11 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Gm27533-201ENSMUST00000183800 152 ntBASIC15.94■□□□□ 0.14
Ush1gQ80T11 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.94■□□□□ 0.14
Ush1gQ80T11 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.94■□□□□ 0.14
Ush1gQ80T11 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.94■□□□□ 0.14
Ush1gQ80T11 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ush1gQ80T11 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.93■□□□□ 0.14
Ush1gQ80T11 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Gm7653-201ENSMUST00000214567 508 ntBASIC15.93■□□□□ 0.14
Ush1gQ80T11 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.93■□□□□ 0.14
Ush1gQ80T11 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ush1gQ80T11 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.92■□□□□ 0.14
Ush1gQ80T11 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.92■□□□□ 0.14
Ush1gQ80T11 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Gm9794-201ENSMUST00000202370 423 ntBASIC15.92■□□□□ 0.14
Ush1gQ80T11 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Gm7775-201ENSMUST00000218871 853 ntBASIC15.92■□□□□ 0.14
Ush1gQ80T11 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ush1gQ80T11 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms