Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Prpf38bQ80SY5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Gm9385-201ENSMUST00000117563 472 ntBASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Gm13829-201ENSMUST00000119600 138 ntBASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Prpf38bQ80SY5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prpf38bQ80SY5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Sybu-209ENSMUST00000228639 4113 ntBASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prpf38bQ80SY5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Gm8410-201ENSMUST00000117225 605 ntBASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Gm16198-201ENSMUST00000118766 670 ntBASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prpf38bQ80SY5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms