Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.21□□□□□ -0.13
Scn4bQ7M729 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scn4bQ7M729 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn4bQ7M729 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.21□□□□□ -0.14
Scn4bQ7M729 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.2□□□□□ -0.14
Scn4bQ7M729 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn4bQ7M729 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.19□□□□□ -0.14
Scn4bQ7M729 Olfr286-202ENSMUST00000205305 969 ntBASIC14.19□□□□□ -0.14
Scn4bQ7M729 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.19□□□□□ -0.14
Scn4bQ7M729 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.19□□□□□ -0.14
Scn4bQ7M729 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn4bQ7M729 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn4bQ7M729 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.18□□□□□ -0.14
Scn4bQ7M729 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms