Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm27459-201ENSMUST00000184860 107 ntBASIC12.26□□□□□ -0.45
Smim12Q78RX3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm45167-201ENSMUST00000208007 322 ntBASIC12.26□□□□□ -0.45
Smim12Q78RX3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm9182-201ENSMUST00000217829 639 ntBASIC12.26□□□□□ -0.45
Smim12Q78RX3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.26□□□□□ -0.45
Smim12Q78RX3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smim12Q78RX3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Gm6376-201ENSMUST00000209407 580 ntBASIC12.25□□□□□ -0.45
Smim12Q78RX3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 AV026068-213ENSMUST00000223675 1171 ntBASIC12.25□□□□□ -0.45
Smim12Q78RX3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.25□□□□□ -0.45
Smim12Q78RX3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.24□□□□□ -0.45
Smim12Q78RX3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms