Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RfflQ6ZQM0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.11□□□□□ -0.15
RfflQ6ZQM0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RfflQ6ZQM0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Gm15165-201ENSMUST00000118140 502 ntBASIC14.1□□□□□ -0.15
RfflQ6ZQM0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RfflQ6ZQM0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Gm8655-201ENSMUST00000221159 852 ntBASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RfflQ6ZQM0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms