Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ddx55Q6ZPL9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Mir1894-201ENSMUST00000122802 81 ntBASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Gm27839-201ENSMUST00000184242 106 ntBASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx55Q6ZPL9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx55Q6ZPL9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx55Q6ZPL9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Ddx55Q6ZPL9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Gm12742-201ENSMUST00000117326 410 ntBASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx55Q6ZPL9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Gm12957-201ENSMUST00000117835 377 ntBASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Gm5425-201ENSMUST00000214125 459 ntBASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Gm17794-201ENSMUST00000220252 955 ntBASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms