Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc2Q6PDG5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Gm11745-201ENSMUST00000121669 448 ntBASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcc2Q6PDG5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcc2Q6PDG5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms