Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm12151-201ENSMUST00000121374 290 ntBASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Gm9824-201ENSMUST00000178707 561 ntBASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Gm17837-201ENSMUST00000186435 985 ntBASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgb4Q6P8W9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Gm18737-201ENSMUST00000173594 937 ntBASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Gm27618-201ENSMUST00000183671 60 ntBASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgb4Q6P8W9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Gm13223-201ENSMUST00000118609 747 ntBASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgb4Q6P8W9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Hmgb4Q6P8W9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms