Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Casc4Q6P2L7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Casc4Q6P2L7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Casc4Q6P2L7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Gm11745-201ENSMUST00000121669 448 ntBASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Casc4Q6P2L7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Gm15483-201ENSMUST00000120338 456 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Gm18737-201ENSMUST00000173594 937 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Gm27494-201ENSMUST00000184735 189 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Casc4Q6P2L7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Casc4Q6P2L7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Casc4Q6P2L7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms