Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sp140Q6NSQ5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm15483-201ENSMUST00000120338 456 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm44492-201ENSMUST00000197012 141 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.79□□□□□ -0.04
Sp140Q6NSQ5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sp140Q6NSQ5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sp140Q6NSQ5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms