Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.3■□□□□ 0.36
Col11a2Q64739 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Col11a2Q64739 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.3■□□□□ 0.36
Col11a2Q64739 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col11a2Q64739 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col11a2Q64739 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col11a2Q64739 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.3■□□□□ 0.36
Col11a2Q64739 Gm37259-201ENSMUST00000193903 849 ntBASIC17.3■□□□□ 0.36
Col11a2Q64739 Gm38223-201ENSMUST00000194484 695 ntBASIC17.3■□□□□ 0.36
Col11a2Q64739 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col11a2Q64739 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Col11a2Q64739 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Mir686-201ENSMUST00000102174 109 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Gm26461-201ENSMUST00000175064 290 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Gm8927-201ENSMUST00000181978 981 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Gm3222-201ENSMUST00000071282 990 ntBASIC17.29■□□□□ 0.36
Col11a2Q64739 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
Col11a2Q64739 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Col11a2Q64739 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col11a2Q64739 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col11a2Q64739 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.28■□□□□ 0.36
Col11a2Q64739 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm12384-201ENSMUST00000119228 919 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm7783-201ENSMUST00000204795 781 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm45880-201ENSMUST00000213041 853 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col11a2Q64739 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col11a2Q64739 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.28■□□□□ 0.36
Col11a2Q64739 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col11a2Q64739 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.27■□□□□ 0.36
Col11a2Q64739 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Col11a2Q64739 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Gm8213-201ENSMUST00000118191 441 ntBASIC17.27■□□□□ 0.36
Col11a2Q64739 Gm10156-201ENSMUST00000122364 462 ntBASIC17.27■□□□□ 0.36
Col11a2Q64739 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.27■□□□□ 0.36
Col11a2Q64739 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.27■□□□□ 0.36
Col11a2Q64739 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.27■□□□□ 0.36
Col11a2Q64739 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.27■□□□□ 0.36
Col11a2Q64739 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col11a2Q64739 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms