Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.43□□□□□ -0.26
VcanQ62059 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.43□□□□□ -0.26
VcanQ62059 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.43□□□□□ -0.26
VcanQ62059 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VcanQ62059 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.43□□□□□ -0.26
VcanQ62059 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
VcanQ62059 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
VcanQ62059 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VcanQ62059 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.42□□□□□ -0.26
VcanQ62059 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
VcanQ62059 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
VcanQ62059 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Gm43818-201ENSMUST00000200605 466 ntBASIC13.42□□□□□ -0.26
VcanQ62059 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.42□□□□□ -0.26
VcanQ62059 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
VcanQ62059 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VcanQ62059 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.42□□□□□ -0.26
VcanQ62059 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.42□□□□□ -0.26
VcanQ62059 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.42□□□□□ -0.26
VcanQ62059 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.42□□□□□ -0.26
VcanQ62059 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.42□□□□□ -0.26
VcanQ62059 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VcanQ62059 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Gm13297-201ENSMUST00000120205 934 ntBASIC13.41□□□□□ -0.26
VcanQ62059 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.41□□□□□ -0.26
VcanQ62059 Gm44364-201ENSMUST00000198368 141 ntBASIC13.41□□□□□ -0.26
VcanQ62059 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.41□□□□□ -0.26
VcanQ62059 Snora73a-201ENSMUST00000082453 205 ntBASIC13.41□□□□□ -0.26
VcanQ62059 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.41□□□□□ -0.26
VcanQ62059 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.41□□□□□ -0.26
VcanQ62059 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VcanQ62059 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.41□□□□□ -0.26
VcanQ62059 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.41□□□□□ -0.26
VcanQ62059 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Mir433-201ENSMUST00000093564 124 ntBASIC13.41□□□□□ -0.26
VcanQ62059 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Gm33320-201ENSMUST00000192232 530 ntBASIC13.41□□□□□ -0.26
VcanQ62059 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VcanQ62059 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VcanQ62059 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VcanQ62059 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.4□□□□□ -0.26
VcanQ62059 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Gm37230-201ENSMUST00000194491 818 ntBASIC13.4□□□□□ -0.26
VcanQ62059 Gm18935-201ENSMUST00000212692 664 ntBASIC13.4□□□□□ -0.26
VcanQ62059 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.4□□□□□ -0.26
VcanQ62059 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.4□□□□□ -0.26
VcanQ62059 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VcanQ62059 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms