Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.24□□□□□ -0.61
Notch3Q61982 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Notch3Q61982 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.24□□□□□ -0.61
Notch3Q61982 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.24□□□□□ -0.61
Notch3Q61982 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Notch3Q61982 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Notch3Q61982 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Notch3Q61982 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Gm14722-201ENSMUST00000118943 689 ntBASIC11.23□□□□□ -0.61
Notch3Q61982 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Notch3Q61982 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Notch3Q61982 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Notch3Q61982 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Notch3Q61982 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Notch3Q61982 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.23□□□□□ -0.61
Notch3Q61982 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.23□□□□□ -0.61
Notch3Q61982 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Gm12490-201ENSMUST00000120255 560 ntBASIC11.23□□□□□ -0.61
Notch3Q61982 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.23□□□□□ -0.61
Notch3Q61982 Gm24158-201ENSMUST00000175263 71 ntBASIC11.23□□□□□ -0.61
Notch3Q61982 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.23□□□□□ -0.61
Notch3Q61982 Gm18766-201ENSMUST00000189811 808 ntBASIC11.23□□□□□ -0.61
Notch3Q61982 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.23□□□□□ -0.61
Notch3Q61982 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Notch3Q61982 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Notch3Q61982 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Gm6912-201ENSMUST00000117218 544 ntBASIC11.22□□□□□ -0.61
Notch3Q61982 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Notch3Q61982 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.22□□□□□ -0.61
Notch3Q61982 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Notch3Q61982 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.22□□□□□ -0.61
Notch3Q61982 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.22□□□□□ -0.61
Notch3Q61982 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.22□□□□□ -0.61
Notch3Q61982 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Notch3Q61982 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms