Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm13183-201ENSMUST00000118615 789 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm29747-201ENSMUST00000194764 585 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm45071-201ENSMUST00000205353 571 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.8□□□□□ -0.68
Foxc1Q61572 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Foxc1Q61572 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Foxc1Q61572 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Foxc1Q61572 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm649-201ENSMUST00000117284 1054 ntBASIC10.79□□□□□ -0.68
Foxc1Q61572 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.79□□□□□ -0.68
Foxc1Q61572 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.79□□□□□ -0.68
Foxc1Q61572 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.79□□□□□ -0.68
Foxc1Q61572 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.79□□□□□ -0.68
Foxc1Q61572 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.79□□□□□ -0.68
Foxc1Q61572 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.79□□□□□ -0.68
Foxc1Q61572 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Foxc1Q61572 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC10.79□□□□□ -0.68
Foxc1Q61572 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Foxc1Q61572 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Foxc1Q61572 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms