Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ift88Q61371 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Ift88Q61371 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ift88Q61371 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ift88Q61371 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ift88Q61371 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ift88Q61371 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ift88Q61371 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Ift88Q61371 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.14■□□□□ 0.17
Ift88Q61371 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
Ift88Q61371 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ift88Q61371 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
Ift88Q61371 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.14■□□□□ 0.17
Ift88Q61371 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Ift88Q61371 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 AV026068-213ENSMUST00000223675 1171 ntBASIC16.14■□□□□ 0.17
Ift88Q61371 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.14■□□□□ 0.17
Ift88Q61371 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ift88Q61371 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ift88Q61371 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ift88Q61371 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
Ift88Q61371 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.13■□□□□ 0.17
Ift88Q61371 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.13■□□□□ 0.17
Ift88Q61371 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Ift88Q61371 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ift88Q61371 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.13■□□□□ 0.17
Ift88Q61371 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ift88Q61371 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ift88Q61371 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Ift88Q61371 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ift88Q61371 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Ift88Q61371 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ift88Q61371 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.12■□□□□ 0.17
Ift88Q61371 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.12■□□□□ 0.17
Ift88Q61371 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ift88Q61371 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ift88Q61371 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ift88Q61371 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.11■□□□□ 0.17
Ift88Q61371 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift88Q61371 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.11■□□□□ 0.17
Ift88Q61371 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ift88Q61371 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.11■□□□□ 0.17
Ift88Q61371 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.11■□□□□ 0.17
Ift88Q61371 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.11■□□□□ 0.17
Ift88Q61371 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms