Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Tnfaip3Q60769 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm2451-201ENSMUST00000199447 999 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm10290-201ENSMUST00000200451 999 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm45098-201ENSMUST00000207179 657 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm18049-201ENSMUST00000208909 581 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tnfaip3Q60769 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Gm25925-201ENSMUST00000158314 306 ntBASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Mir6956-201ENSMUST00000183598 62 ntBASIC13.71□□□□□ -0.21
Tnfaip3Q60769 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tnfaip3Q60769 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tnfaip3Q60769 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Gm9726-201ENSMUST00000180321 678 ntBASIC13.7□□□□□ -0.22
Tnfaip3Q60769 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.7□□□□□ -0.22
Tnfaip3Q60769 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms