Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf20Q5DTM8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf20Q5DTM8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf20Q5DTM8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf20Q5DTM8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Gm14494-201ENSMUST00000118786 435 ntBASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Gm14042-201ENSMUST00000120139 833 ntBASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf20Q5DTM8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms