Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm6152-201ENSMUST00000151704 340 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Gm27847-201ENSMUST00000183711 107 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Gm27375-201ENSMUST00000183799 107 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Gm18473-201ENSMUST00000220543 868 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shank3Q4ACU6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Gm38241-201ENSMUST00000192641 898 ntBASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Gm19184-201ENSMUST00000196798 928 ntBASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Gm40466-201ENSMUST00000212174 422 ntBASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Shank3Q4ACU6 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.77■□□□□ 0.44
Shank3Q4ACU6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Shank3Q4ACU6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Gm27331-201ENSMUST00000183705 60 ntBASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shank3Q4ACU6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm16177-201ENSMUST00000120728 718 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm22331-201ENSMUST00000158066 136 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm38002-201ENSMUST00000193255 180 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms