Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Gm24694-201ENSMUST00000180054 110 ntBASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Gm27663-201ENSMUST00000184839 110 ntBASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp48Q3V0C5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Gm8515-201ENSMUST00000194852 576 ntBASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp48Q3V0C5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm15653-201ENSMUST00000119247 907 ntBASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm18062-201ENSMUST00000208020 547 ntBASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm18055-201ENSMUST00000208254 547 ntBASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Gm9899-201ENSMUST00000065519 555 ntBASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Usp48Q3V0C5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.02■□□□□ 0.47
Usp48Q3V0C5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp48Q3V0C5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Usp48Q3V0C5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm27920-201ENSMUST00000183953 96 ntBASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm8602-201ENSMUST00000184045 607 ntBASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Gm44719-201ENSMUST00000206404 149 ntBASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Usp48Q3V0C5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18■□□□□ 0.47
Usp48Q3V0C5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Usp48Q3V0C5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp48Q3V0C5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp48Q3V0C5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp48Q3V0C5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms