Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.11□□□□□ -0.47
Znf48Q3US17 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.11□□□□□ -0.47
Znf48Q3US17 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm22885-201ENSMUST00000157410 107 ntBASIC12.11□□□□□ -0.47
Znf48Q3US17 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm25948-201ENSMUST00000175334 112 ntBASIC12.11□□□□□ -0.47
Znf48Q3US17 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC12.11□□□□□ -0.47
Znf48Q3US17 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.11□□□□□ -0.47
Znf48Q3US17 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.11□□□□□ -0.47
Znf48Q3US17 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.11□□□□□ -0.47
Znf48Q3US17 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Znf48Q3US17 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Znf48Q3US17 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm8344-201ENSMUST00000119813 856 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm13366-201ENSMUST00000122198 970 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Znf48Q3US17 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.1□□□□□ -0.47
Znf48Q3US17 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Znf48Q3US17 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Znf48Q3US17 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Znf48Q3US17 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Znf48Q3US17 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Znf48Q3US17 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Znf48Q3US17 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Znf48Q3US17 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Znf48Q3US17 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.09□□□□□ -0.47
Znf48Q3US17 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms