Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cks1brtQ3UNC9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cks1brtQ3UNC9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Gm10052-201ENSMUST00000168019 960 ntBASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Gm7729-201ENSMUST00000050143 801 ntBASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms