Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Naf1Q3UMQ8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Sybu-209ENSMUST00000228639 4113 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Gm13453-201ENSMUST00000118708 357 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Gm25144-201ENSMUST00000179561 110 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Gm25352-201ENSMUST00000179815 110 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Gm27533-201ENSMUST00000183800 152 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.81□□□□□ -0.04
Naf1Q3UMQ8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Gm37230-201ENSMUST00000194491 818 ntBASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Naf1Q3UMQ8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Gm9719-201ENSMUST00000162765 543 ntBASIC14.79□□□□□ -0.04
Naf1Q3UMQ8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms