Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Q3U1D9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.65□□□□□ -0.38
Q3U1D9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.65□□□□□ -0.38
Q3U1D9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Q3U1D9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.65□□□□□ -0.38
Q3U1D9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Gm27680-201ENSMUST00000184192 160 ntBASIC12.65□□□□□ -0.38
Q3U1D9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Q3U1D9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.65□□□□□ -0.38
Q3U1D9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Q3U1D9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.65□□□□□ -0.38
Q3U1D9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Q3U1D9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.65□□□□□ -0.38
Q3U1D9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3U1D9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Q3U1D9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q3U1D9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q3U1D9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.64□□□□□ -0.39
Q3U1D9 Gm12428-201ENSMUST00000119844 727 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.64□□□□□ -0.39
Q3U1D9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.64□□□□□ -0.39
Q3U1D9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.64□□□□□ -0.39
Q3U1D9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Q3U1D9 Gm29310-201ENSMUST00000185468 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21825-201ENSMUST00000185728 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm29109-201ENSMUST00000185895 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21896-201ENSMUST00000186520 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21873-201ENSMUST00000186728 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21794-201ENSMUST00000187056 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21880-201ENSMUST00000187275 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21826-201ENSMUST00000187451 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21198-201ENSMUST00000188393 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21749-201ENSMUST00000189343 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21901-201ENSMUST00000189568 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm29424-201ENSMUST00000189716 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm28599-201ENSMUST00000189838 694 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21867-201ENSMUST00000189917 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm29269-201ENSMUST00000190087 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21722-201ENSMUST00000190153 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm28423-201ENSMUST00000190701 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21899-201ENSMUST00000190745 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21910-201ENSMUST00000191163 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21849-201ENSMUST00000191571 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm28678-201ENSMUST00000191593 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm20910-201ENSMUST00000193268 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Gm21871-201ENSMUST00000194621 696 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.64□□□□□ -0.39
Q3U1D9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.64□□□□□ -0.39
Q3U1D9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Q3U1D9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3U1D9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms