Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Gm11557-201ENSMUST00000120200 1008 ntBASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Gm8927-201ENSMUST00000181978 981 ntBASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Gm4857-201ENSMUST00000192718 785 ntBASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Gm3222-201ENSMUST00000071282 990 ntBASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm1Q2TV84 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Gm27516-201ENSMUST00000184237 98 ntBASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Gm38341-201ENSMUST00000195357 515 ntBASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Gm17823-201ENSMUST00000217830 1006 ntBASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm1Q2TV84 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gm7029-201ENSMUST00000173226 450 ntBASIC20.27■□□□□ 0.84
Trpm1Q2TV84 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gm18056-201ENSMUST00000207670 568 ntBASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gm18061-201ENSMUST00000208350 562 ntBASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gm18063-201ENSMUST00000208529 568 ntBASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gm18052-201ENSMUST00000208750 559 ntBASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm1Q2TV84 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Mir686-201ENSMUST00000102174 109 ntBASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Gm38266-201ENSMUST00000194931 421 ntBASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Gm42929-201ENSMUST00000198374 1286 ntBASIC20.27■□□□□ 0.83
Trpm1Q2TV84 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm1Q2TV84 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Gm43818-201ENSMUST00000200605 466 ntBASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Olfr284-202ENSMUST00000206647 966 ntBASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Cts7-204ENSMUST00000225321 1257 ntBASIC20.26■□□□□ 0.83
Trpm1Q2TV84 AC140406.1-201ENSMUST00000226481 465 ntBASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm1Q2TV84 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Gm27501-201ENSMUST00000183599 107 ntBASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms