Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a2Q02788 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.55□□□□□ -0.08
Col6a2Q02788 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a2Q02788 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.54□□□□□ -0.08
Col6a2Q02788 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Efs-202ENSMUST00000227037 2540 ntBASIC14.54□□□□□ -0.08
Col6a2Q02788 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.54□□□□□ -0.08
Col6a2Q02788 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.54□□□□□ -0.08
Col6a2Q02788 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.54□□□□□ -0.08
Col6a2Q02788 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Olfr286-202ENSMUST00000205305 969 ntBASIC14.54□□□□□ -0.08
Col6a2Q02788 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Col6a2Q02788 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a2Q02788 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col6a2Q02788 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.53□□□□□ -0.08
Col6a2Q02788 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm13223-201ENSMUST00000118609 747 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm13823-201ENSMUST00000119930 345 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm14057-201ENSMUST00000120631 482 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.53□□□□□ -0.08
Col6a2Q02788 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.53□□□□□ -0.08
Col6a2Q02788 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Mir7023-201ENSMUST00000185093 64 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm9182-201ENSMUST00000217829 639 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm6888-201ENSMUST00000221983 706 ntBASIC14.53□□□□□ -0.08
Col6a2Q02788 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col6a2Q02788 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a2Q02788 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Col6a2Q02788 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a2Q02788 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.52□□□□□ -0.09
Col6a2Q02788 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.52□□□□□ -0.09
Col6a2Q02788 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.52□□□□□ -0.09
Col6a2Q02788 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a2Q02788 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms