Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim43cP86449 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.85■□□□□ 0.13
Trim43cP86449 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.85■□□□□ 0.13
Trim43cP86449 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.85■□□□□ 0.13
Trim43cP86449 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.85■□□□□ 0.13
Trim43cP86449 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim43cP86449 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trim43cP86449 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.84■□□□□ 0.13
Trim43cP86449 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim43cP86449 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.84■□□□□ 0.13
Trim43cP86449 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trim43cP86449 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim43cP86449 Gm10275-202ENSMUST00000168697 495 ntBASIC15.84■□□□□ 0.13
Trim43cP86449 Gm18889-201ENSMUST00000174284 929 ntBASIC15.84■□□□□ 0.13
Trim43cP86449 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Gm10275-201ENSMUST00000092620 635 ntBASIC15.84■□□□□ 0.13
Trim43cP86449 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
Trim43cP86449 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim43cP86449 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.84■□□□□ 0.13
Trim43cP86449 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim43cP86449 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim43cP86449 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trim43cP86449 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim43cP86449 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Trim43cP86449 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim43cP86449 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim43cP86449 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.83■□□□□ 0.12
Trim43cP86449 Gm9182-201ENSMUST00000217829 639 ntBASIC15.83■□□□□ 0.12
Trim43cP86449 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 Chchd1-203ENSMUST00000224633 557 ntBASIC15.83■□□□□ 0.12
Trim43cP86449 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim43cP86449 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Trim43cP86449 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.83■□□□□ 0.12
Trim43cP86449 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim43cP86449 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim43cP86449 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm13015-201ENSMUST00000118674 204 ntBASIC15.82■□□□□ 0.12
Trim43cP86449 Gm14042-201ENSMUST00000120139 833 ntBASIC15.82■□□□□ 0.12
Trim43cP86449 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.82■□□□□ 0.12
Trim43cP86449 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim43cP86449 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Trim43cP86449 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.82■□□□□ 0.12
Trim43cP86449 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim43cP86449 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim43cP86449 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim43cP86449 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim43cP86449 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim43cP86449 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms