Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13□□□□□ -0.33
SgcbP82349 Gm43474-201ENSMUST00000196415 774 ntBASIC13□□□□□ -0.33
SgcbP82349 Gm5312-201ENSMUST00000203728 547 ntBASIC13□□□□□ -0.33
SgcbP82349 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13□□□□□ -0.33
SgcbP82349 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13□□□□□ -0.33
SgcbP82349 AC131710.1-201ENSMUST00000228336 990 ntBASIC13□□□□□ -0.33
SgcbP82349 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13□□□□□ -0.33
SgcbP82349 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SgcbP82349 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SgcbP82349 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SgcbP82349 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SgcbP82349 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Gm2810-201ENSMUST00000118681 990 ntBASIC12.99□□□□□ -0.33
SgcbP82349 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.99□□□□□ -0.33
SgcbP82349 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SgcbP82349 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SgcbP82349 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SgcbP82349 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.99□□□□□ -0.33
SgcbP82349 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Gm45098-201ENSMUST00000207179 657 ntBASIC12.99□□□□□ -0.33
SgcbP82349 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Gm8396-201ENSMUST00000057361 823 ntBASIC12.99□□□□□ -0.33
SgcbP82349 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
SgcbP82349 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SgcbP82349 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SgcbP82349 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.98□□□□□ -0.33
SgcbP82349 Gm5479-201ENSMUST00000160578 435 ntBASIC12.98□□□□□ -0.33
SgcbP82349 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.98□□□□□ -0.33
SgcbP82349 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.98□□□□□ -0.33
SgcbP82349 Gm9182-201ENSMUST00000217829 639 ntBASIC12.98□□□□□ -0.33
SgcbP82349 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SgcbP82349 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcbP82349 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
SgcbP82349 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SgcbP82349 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.97□□□□□ -0.33
SgcbP82349 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SgcbP82349 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms