Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Shox2P70390 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.4□□□□□ -0.1
Shox2P70390 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shox2P70390 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shox2P70390 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Shox2P70390 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.39□□□□□ -0.11
Shox2P70390 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Gm4459-201ENSMUST00000118750 468 ntBASIC14.39□□□□□ -0.11
Shox2P70390 Gm15794-201ENSMUST00000120182 631 ntBASIC14.39□□□□□ -0.11
Shox2P70390 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Shox2P70390 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shox2P70390 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.38□□□□□ -0.11
Shox2P70390 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.38□□□□□ -0.11
Shox2P70390 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.38□□□□□ -0.11
Shox2P70390 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Shox2P70390 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Shox2P70390 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Rprl3-201ENSMUST00000157400 290 ntBASIC14.38□□□□□ -0.11
Shox2P70390 Gm7977-201ENSMUST00000193787 748 ntBASIC14.38□□□□□ -0.11
Shox2P70390 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
Shox2P70390 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Shox2P70390 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.38□□□□□ -0.11
Shox2P70390 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shox2P70390 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shox2P70390 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shox2P70390 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.37□□□□□ -0.11
Shox2P70390 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.37□□□□□ -0.11
Shox2P70390 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Shox2P70390 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Shox2P70390 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shox2P70390 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms