Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Msx3P70354 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Msx3P70354 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Msx3P70354 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.98□□□□□ -0.01
Msx3P70354 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Msx3P70354 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.98□□□□□ -0.01
Msx3P70354 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.98□□□□□ -0.01
Msx3P70354 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Msx3P70354 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Gm17968-201ENSMUST00000194902 784 ntBASIC14.98□□□□□ -0.01
Msx3P70354 Gm5364-201ENSMUST00000216789 889 ntBASIC14.98□□□□□ -0.01
Msx3P70354 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Msx3P70354 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Msx3P70354 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.98□□□□□ -0.01
Msx3P70354 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Msx3P70354 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.97□□□□□ -0.01
Msx3P70354 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.97□□□□□ -0.01
Msx3P70354 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx3P70354 Gm9385-201ENSMUST00000117563 472 ntBASIC14.97□□□□□ -0.01
Msx3P70354 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Msx3P70354 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Msx3P70354 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.97□□□□□ -0.01
Msx3P70354 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Msx3P70354 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx3P70354 Mir8117-201ENSMUST00000184773 107 ntBASIC14.97□□□□□ -0.01
Msx3P70354 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Msx3P70354 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.97□□□□□ -0.01
Msx3P70354 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.97□□□□□ -0.01
Msx3P70354 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Msx3P70354 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Msx3P70354 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Msx3P70354 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.96□□□□□ -0.01
Msx3P70354 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.96□□□□□ -0.01
Msx3P70354 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Msx3P70354 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Msx3P70354 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.96□□□□□ -0.01
Msx3P70354 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.96□□□□□ -0.01
Msx3P70354 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Msx3P70354 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Msx3P70354 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Msx3P70354 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Msx3P70354 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Msx3P70354 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Msx3P70354 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms