Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.14□□□□□ -0.47
Pdlim4P70271 Gm9385-201ENSMUST00000117563 472 ntBASIC12.14□□□□□ -0.47
Pdlim4P70271 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.14□□□□□ -0.47
Pdlim4P70271 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Gm27397-201ENSMUST00000184997 107 ntBASIC12.14□□□□□ -0.47
Pdlim4P70271 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.14□□□□□ -0.47
Pdlim4P70271 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pdlim4P70271 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Pdlim4P70271 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdlim4P70271 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm16026-204ENSMUST00000162652 683 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm24513-201ENSMUST00000174964 138 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm37935-201ENSMUST00000192012 982 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.13□□□□□ -0.47
Pdlim4P70271 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdlim4P70271 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdlim4P70271 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.12□□□□□ -0.47
Pdlim4P70271 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pdlim4P70271 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.12□□□□□ -0.47
Pdlim4P70271 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdlim4P70271 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms