Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Crnkl1P63154 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Crnkl1P63154 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Crnkl1P63154 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Crnkl1P63154 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.44□□□□□ -0.1
Crnkl1P63154 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Crnkl1P63154 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.44□□□□□ -0.1
Crnkl1P63154 Gm12644-201ENSMUST00000119935 606 ntBASIC14.44□□□□□ -0.1
Crnkl1P63154 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.44□□□□□ -0.1
Crnkl1P63154 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.44□□□□□ -0.1
Crnkl1P63154 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.44□□□□□ -0.1
Crnkl1P63154 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Crnkl1P63154 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Crnkl1P63154 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Crnkl1P63154 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Crnkl1P63154 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.43□□□□□ -0.1
Crnkl1P63154 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm24589-201ENSMUST00000116692 94 ntBASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm27867-201ENSMUST00000184778 125 ntBASIC14.43□□□□□ -0.1
Crnkl1P63154 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.43□□□□□ -0.1
Crnkl1P63154 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.43□□□□□ -0.1
Crnkl1P63154 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.43□□□□□ -0.1
Crnkl1P63154 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Crnkl1P63154 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.43□□□□□ -0.1
Crnkl1P63154 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.43□□□□□ -0.1
Crnkl1P63154 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Crnkl1P63154 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Crnkl1P63154 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.42□□□□□ -0.1
Crnkl1P63154 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.42□□□□□ -0.1
Crnkl1P63154 Gm43347-201ENSMUST00000200226 580 ntBASIC14.42□□□□□ -0.1
Crnkl1P63154 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.42□□□□□ -0.1
Crnkl1P63154 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Crnkl1P63154 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms