Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.91□□□□□ -0.02
Ybx1P62960 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Gm6180-201ENSMUST00000065243 498 ntBASIC14.91□□□□□ -0.02
Ybx1P62960 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ybx1P62960 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ybx1P62960 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.91□□□□□ -0.02
Ybx1P62960 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ybx1P62960 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.9□□□□□ -0.02
Ybx1P62960 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.9□□□□□ -0.02
Ybx1P62960 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ybx1P62960 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.9□□□□□ -0.02
Ybx1P62960 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.9□□□□□ -0.02
Ybx1P62960 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.9□□□□□ -0.02
Ybx1P62960 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Gm37230-201ENSMUST00000194491 818 ntBASIC14.9□□□□□ -0.02
Ybx1P62960 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.9□□□□□ -0.02
Ybx1P62960 Gm45453-201ENSMUST00000211758 853 ntBASIC14.9□□□□□ -0.02
Ybx1P62960 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ybx1P62960 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.9□□□□□ -0.02
Ybx1P62960 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ybx1P62960 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.89□□□□□ -0.03
Ybx1P62960 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.89□□□□□ -0.03
Ybx1P62960 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ybx1P62960 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.89□□□□□ -0.03
Ybx1P62960 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.89□□□□□ -0.03
Ybx1P62960 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ybx1P62960 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Gm8749-201ENSMUST00000117737 331 ntBASIC14.89□□□□□ -0.03
Ybx1P62960 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Gm3436-201ENSMUST00000179930 840 ntBASIC14.89□□□□□ -0.03
Ybx1P62960 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.89□□□□□ -0.03
Ybx1P62960 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ybx1P62960 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ybx1P62960 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ybx1P62960 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ybx1P62960 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Ybx1P62960 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.88□□□□□ -0.03
Ybx1P62960 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Ybx1P62960 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.88□□□□□ -0.03
Ybx1P62960 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms