Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lmo4P61969 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.75□□□□□ -0.53
Lmo4P61969 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Lmo4P61969 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.75□□□□□ -0.53
Lmo4P61969 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.75□□□□□ -0.53
Lmo4P61969 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lmo4P61969 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.75□□□□□ -0.53
Lmo4P61969 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.75□□□□□ -0.53
Lmo4P61969 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lmo4P61969 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Lmo4P61969 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Lmo4P61969 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lmo4P61969 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.74□□□□□ -0.53
Lmo4P61969 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lmo4P61969 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lmo4P61969 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.74□□□□□ -0.53
Lmo4P61969 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.74□□□□□ -0.53
Lmo4P61969 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.74□□□□□ -0.53
Lmo4P61969 Gm33320-201ENSMUST00000192232 530 ntBASIC11.74□□□□□ -0.53
Lmo4P61969 Gm42612-201ENSMUST00000197986 623 ntBASIC11.74□□□□□ -0.53
Lmo4P61969 Gm43170-201ENSMUST00000199827 612 ntBASIC11.74□□□□□ -0.53
Lmo4P61969 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lmo4P61969 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.74□□□□□ -0.53
Lmo4P61969 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lmo4P61969 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.74□□□□□ -0.53
Lmo4P61969 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lmo4P61969 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lmo4P61969 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.73□□□□□ -0.53
Lmo4P61969 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lmo4P61969 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lmo4P61969 Gm12585-201ENSMUST00000117307 290 ntBASIC11.73□□□□□ -0.53
Lmo4P61969 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Lmo4P61969 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lmo4P61969 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.73□□□□□ -0.53
Lmo4P61969 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lmo4P61969 Gm21854-201ENSMUST00000179901 471 ntBASIC11.73□□□□□ -0.53
Lmo4P61969 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.73□□□□□ -0.53
Lmo4P61969 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Lmo4P61969 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lmo4P61969 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.73□□□□□ -0.53
Lmo4P61969 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lmo4P61969 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms