Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdh11P55288 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.31□□□□□ -0.28
Cdh11P55288 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Gm45167-201ENSMUST00000208007 322 ntBASIC13.31□□□□□ -0.28
Cdh11P55288 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.31□□□□□ -0.28
Cdh11P55288 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.31□□□□□ -0.28
Cdh11P55288 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.31□□□□□ -0.28
Cdh11P55288 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdh11P55288 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh11P55288 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cdh11P55288 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh11P55288 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh11P55288 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdh11P55288 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdh11P55288 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh11P55288 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh11P55288 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Cdh11P55288 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh11P55288 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.29□□□□□ -0.28
Cdh11P55288 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.29□□□□□ -0.28
Cdh11P55288 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.29□□□□□ -0.28
Cdh11P55288 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm6736-201ENSMUST00000166583 948 ntBASIC13.29□□□□□ -0.28
Cdh11P55288 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm27702-201ENSMUST00000184512 56 ntBASIC13.29□□□□□ -0.28
Cdh11P55288 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.29□□□□□ -0.28
Cdh11P55288 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdh11P55288 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cdh11P55288 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cdh11P55288 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh11P55288 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh11P55288 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms