Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.69■□□□□ 0.1
Nub1P54729 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.69■□□□□ 0.1
Nub1P54729 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Nub1P54729 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.69■□□□□ 0.1
Nub1P54729 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nub1P54729 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nub1P54729 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nub1P54729 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nub1P54729 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nub1P54729 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nub1P54729 Gm13365-201ENSMUST00000121188 973 ntBASIC15.68■□□□□ 0.1
Nub1P54729 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.68■□□□□ 0.1
Nub1P54729 Gm9726-201ENSMUST00000180321 678 ntBASIC15.68■□□□□ 0.1
Nub1P54729 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nub1P54729 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nub1P54729 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Nub1P54729 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nub1P54729 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nub1P54729 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nub1P54729 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nub1P54729 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.67■□□□□ 0.1
Nub1P54729 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Nub1P54729 Gm27920-201ENSMUST00000183953 96 ntBASIC15.67■□□□□ 0.1
Nub1P54729 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Gm27702-201ENSMUST00000184512 56 ntBASIC15.67■□□□□ 0.1
Nub1P54729 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.67■□□□□ 0.1
Nub1P54729 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.67■□□□□ 0.1
Nub1P54729 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Nub1P54729 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nub1P54729 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Nub1P54729 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nub1P54729 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nub1P54729 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.66■□□□□ 0.1
Nub1P54729 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Nub1P54729 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.66■□□□□ 0.1
Nub1P54729 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Nub1P54729 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.66■□□□□ 0.1
Nub1P54729 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Gm18057-201ENSMUST00000208220 503 ntBASIC15.66■□□□□ 0.1
Nub1P54729 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.66■□□□□ 0.1
Nub1P54729 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nub1P54729 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nub1P54729 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms