Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Msh6P54276 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.36■□□□□ 0.53
Msh6P54276 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
Msh6P54276 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.36■□□□□ 0.53
Msh6P54276 Mir125a-201ENSMUST00000083545 68 ntBASIC18.36■□□□□ 0.53
Msh6P54276 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Msh6P54276 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.36■□□□□ 0.53
Msh6P54276 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Msh6P54276 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.35■□□□□ 0.53
Msh6P54276 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Gm15806-201ENSMUST00000120696 955 ntBASIC18.35■□□□□ 0.53
Msh6P54276 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Msh6P54276 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.35■□□□□ 0.53
Msh6P54276 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.35■□□□□ 0.53
Msh6P54276 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Msh6P54276 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Msh6P54276 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.35■□□□□ 0.53
Msh6P54276 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Msh6P54276 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Msh6P54276 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Msh6P54276 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Msh6P54276 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Msh6P54276 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Msh6P54276 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.34■□□□□ 0.53
Msh6P54276 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.34■□□□□ 0.53
Msh6P54276 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.34■□□□□ 0.53
Msh6P54276 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Msh6P54276 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Msh6P54276 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Msh6P54276 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.33■□□□□ 0.53
Msh6P54276 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.33■□□□□ 0.53
Msh6P54276 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.33■□□□□ 0.53
Msh6P54276 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.33■□□□□ 0.53
Msh6P54276 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Msh6P54276 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh6P54276 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Msh6P54276 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh6P54276 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Msh6P54276 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msh6P54276 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Msh6P54276 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Msh6P54276 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Mir6392-201ENSMUST00000184924 108 ntBASIC18.32■□□□□ 0.52
Msh6P54276 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.32■□□□□ 0.52
Msh6P54276 Gm5035-201ENSMUST00000215581 927 ntBASIC18.32■□□□□ 0.52
Msh6P54276 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.32■□□□□ 0.52
Msh6P54276 Gm19220-201ENSMUST00000222682 803 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms