Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sox1P53783 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sox1P53783 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.8□□□□□ -0.04
Sox1P53783 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox1P53783 Gm44364-201ENSMUST00000198368 141 ntBASIC14.8□□□□□ -0.04
Sox1P53783 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sox1P53783 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox1P53783 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sox1P53783 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox1P53783 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox1P53783 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.79□□□□□ -0.04
Sox1P53783 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.79□□□□□ -0.04
Sox1P53783 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.79□□□□□ -0.04
Sox1P53783 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Gm43818-201ENSMUST00000200605 466 ntBASIC14.79□□□□□ -0.04
Sox1P53783 Gm9182-201ENSMUST00000217829 639 ntBASIC14.79□□□□□ -0.04
Sox1P53783 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.79□□□□□ -0.04
Sox1P53783 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.79□□□□□ -0.04
Sox1P53783 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox1P53783 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Gm10012-201ENSMUST00000078252 192 ntBASIC14.79□□□□□ -0.04
Sox1P53783 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
Sox1P53783 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox1P53783 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox1P53783 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox1P53783 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox1P53783 Gm12997-201ENSMUST00000120207 640 ntBASIC14.78□□□□□ -0.04
Sox1P53783 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox1P53783 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Sox1P53783 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox1P53783 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox1P53783 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.78□□□□□ -0.04
Sox1P53783 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox1P53783 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.78□□□□□ -0.04
Sox1P53783 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Gm17795-201ENSMUST00000214505 757 ntBASIC14.78□□□□□ -0.04
Sox1P53783 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox1P53783 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox1P53783 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
Sox1P53783 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Sox1P53783 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox1P53783 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms