Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.95□□□□□ -0.02
TubP50586 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TubP50586 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TubP50586 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TubP50586 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TubP50586 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TubP50586 Gm14701-201ENSMUST00000117156 348 ntBASIC14.94□□□□□ -0.02
TubP50586 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.94□□□□□ -0.02
TubP50586 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.94□□□□□ -0.02
TubP50586 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.94□□□□□ -0.02
TubP50586 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TubP50586 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TubP50586 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.94□□□□□ -0.02
TubP50586 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.93□□□□□ -0.02
TubP50586 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.93□□□□□ -0.02
TubP50586 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Gm25287-201ENSMUST00000103846 110 ntBASIC14.93□□□□□ -0.02
TubP50586 Gm22918-201ENSMUST00000103855 110 ntBASIC14.93□□□□□ -0.02
TubP50586 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TubP50586 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TubP50586 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TubP50586 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.93□□□□□ -0.02
TubP50586 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.93□□□□□ -0.02
TubP50586 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.93□□□□□ -0.02
TubP50586 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.93□□□□□ -0.02
TubP50586 Gm5312-201ENSMUST00000203728 547 ntBASIC14.93□□□□□ -0.02
TubP50586 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.93□□□□□ -0.02
TubP50586 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TubP50586 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TubP50586 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TubP50586 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.93□□□□□ -0.02
TubP50586 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TubP50586 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.92□□□□□ -0.02
TubP50586 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TubP50586 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
TubP50586 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TubP50586 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.92□□□□□ -0.02
TubP50586 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.92□□□□□ -0.02
TubP50586 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TubP50586 Gm37230-201ENSMUST00000194491 818 ntBASIC14.92□□□□□ -0.02
TubP50586 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms