Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ercc3P49135 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ercc3P49135 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ercc3P49135 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ercc3P49135 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.3■□□□□ 0.36
Ercc3P49135 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ercc3P49135 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Ercc3P49135 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Ercc3P49135 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.3■□□□□ 0.36
Ercc3P49135 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.3■□□□□ 0.36
Ercc3P49135 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ercc3P49135 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ercc3P49135 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ercc3P49135 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.29■□□□□ 0.36
Ercc3P49135 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.29■□□□□ 0.36
Ercc3P49135 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ercc3P49135 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ercc3P49135 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ercc3P49135 Gm5479-201ENSMUST00000160578 435 ntBASIC17.28■□□□□ 0.36
Ercc3P49135 Gm9726-201ENSMUST00000180321 678 ntBASIC17.28■□□□□ 0.36
Ercc3P49135 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Ercc3P49135 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ercc3P49135 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ercc3P49135 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ercc3P49135 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
Ercc3P49135 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.27■□□□□ 0.36
Ercc3P49135 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ercc3P49135 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.27■□□□□ 0.36
Ercc3P49135 Gm8749-201ENSMUST00000117737 331 ntBASIC17.27■□□□□ 0.36
Ercc3P49135 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.27■□□□□ 0.36
Ercc3P49135 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.27■□□□□ 0.36
Ercc3P49135 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.27■□□□□ 0.36
Ercc3P49135 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ercc3P49135 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms