Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps4bP46467 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Vps4bP46467 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4bP46467 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps4bP46467 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Vps4bP46467 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps4bP46467 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps4bP46467 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Gm15467-201ENSMUST00000120582 445 ntBASIC14.79□□□□□ -0.04
Vps4bP46467 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Gm12350-201ENSMUST00000121208 462 ntBASIC14.79□□□□□ -0.04
Vps4bP46467 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Vps4bP46467 Mir5126-201ENSMUST00000175513 77 ntBASIC14.79□□□□□ -0.04
Vps4bP46467 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.79□□□□□ -0.04
Vps4bP46467 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps4bP46467 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps4bP46467 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps4bP46467 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps4bP46467 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4bP46467 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps4bP46467 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.78□□□□□ -0.04
Vps4bP46467 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.78□□□□□ -0.04
Vps4bP46467 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.78□□□□□ -0.04
Vps4bP46467 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps4bP46467 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps4bP46467 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.78□□□□□ -0.04
Vps4bP46467 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps4bP46467 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps4bP46467 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps4bP46467 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps4bP46467 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps4bP46467 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Gm27628-201ENSMUST00000184911 107 ntBASIC14.78□□□□□ -0.04
Vps4bP46467 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.78□□□□□ -0.04
Vps4bP46467 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps4bP46467 Gm43575-201ENSMUST00000196420 516 ntBASIC14.78□□□□□ -0.04
Vps4bP46467 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps4bP46467 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps4bP46467 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4bP46467 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4bP46467 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4bP46467 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.77□□□□□ -0.04
Vps4bP46467 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4bP46467 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4bP46467 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps4bP46467 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.77□□□□□ -0.04
Vps4bP46467 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps4bP46467 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.77□□□□□ -0.05
Vps4bP46467 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4bP46467 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps4bP46467 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.77□□□□□ -0.05
Vps4bP46467 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.77□□□□□ -0.05
Vps4bP46467 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4bP46467 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4bP46467 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps4bP46467 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps4bP46467 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vps4bP46467 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms