Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.97□□□□□ -0.17
Sox18P43680 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.97□□□□□ -0.17
Sox18P43680 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.97□□□□□ -0.17
Sox18P43680 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Gm9797-201ENSMUST00000052902 613 ntBASIC13.97□□□□□ -0.17
Sox18P43680 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sox18P43680 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Sox18P43680 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox18P43680 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox18P43680 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.96□□□□□ -0.17
Sox18P43680 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Sox18P43680 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox18P43680 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox18P43680 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox18P43680 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox18P43680 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox18P43680 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.96□□□□□ -0.17
Sox18P43680 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox18P43680 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox18P43680 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.96□□□□□ -0.17
Sox18P43680 Gm18363-201ENSMUST00000221671 730 ntBASIC13.96□□□□□ -0.17
Sox18P43680 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.96□□□□□ -0.17
Sox18P43680 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox18P43680 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox18P43680 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox18P43680 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox18P43680 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox18P43680 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox18P43680 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox18P43680 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Sox18P43680 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.95□□□□□ -0.18
Sox18P43680 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox18P43680 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Sox18P43680 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Gm2594-201ENSMUST00000214774 742 ntBASIC13.95□□□□□ -0.18
Sox18P43680 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Gm19220-201ENSMUST00000222682 803 ntBASIC13.95□□□□□ -0.18
Sox18P43680 Dupd1-202ENSMUST00000224735 548 ntBASIC13.95□□□□□ -0.18
Sox18P43680 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.95□□□□□ -0.18
Sox18P43680 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Sox18P43680 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox18P43680 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox18P43680 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms