Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sdc2P43407 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sdc2P43407 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.36■□□□□ 0.21
Sdc2P43407 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.36■□□□□ 0.21
Sdc2P43407 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.36■□□□□ 0.21
Sdc2P43407 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sdc2P43407 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Sdc2P43407 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.35■□□□□ 0.21
Sdc2P43407 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.35■□□□□ 0.21
Sdc2P43407 Gm13597-201ENSMUST00000121239 375 ntBASIC16.35■□□□□ 0.21
Sdc2P43407 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.35■□□□□ 0.21
Sdc2P43407 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sdc2P43407 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.35■□□□□ 0.21
Sdc2P43407 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.35■□□□□ 0.21
Sdc2P43407 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.35■□□□□ 0.21
Sdc2P43407 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.35■□□□□ 0.21
Sdc2P43407 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.35■□□□□ 0.21
Sdc2P43407 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Sdc2P43407 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.35■□□□□ 0.21
Sdc2P43407 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Sdc2P43407 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Sdc2P43407 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sdc2P43407 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sdc2P43407 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Sdc2P43407 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc2P43407 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.34■□□□□ 0.21
Sdc2P43407 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.34■□□□□ 0.21
Sdc2P43407 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc2P43407 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.34■□□□□ 0.21
Sdc2P43407 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.34■□□□□ 0.21
Sdc2P43407 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.33■□□□□ 0.21
Sdc2P43407 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc2P43407 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc2P43407 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc2P43407 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.33■□□□□ 0.21
Sdc2P43407 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Sdc2P43407 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Gm12350-201ENSMUST00000121208 462 ntBASIC16.33■□□□□ 0.2
Sdc2P43407 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.33■□□□□ 0.2
Sdc2P43407 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sdc2P43407 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.33■□□□□ 0.2
Sdc2P43407 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Gm2272-201ENSMUST00000194903 582 ntBASIC16.33■□□□□ 0.2
Sdc2P43407 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.33■□□□□ 0.2
Sdc2P43407 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc2P43407 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms