Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Msh2P43247 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.03■□□□□ -0
Msh2P43247 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msh2P43247 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.03■□□□□ -0
Msh2P43247 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.03■□□□□ -0
Msh2P43247 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.03■□□□□ -0
Msh2P43247 Gm6443-201ENSMUST00000203599 874 ntBASIC15.03■□□□□ -0
Msh2P43247 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.03■□□□□ -0
Msh2P43247 Psmb5-202ENSMUST00000227257 622 ntBASIC15.03■□□□□ -0
Msh2P43247 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Msh2P43247 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Msh2P43247 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.03■□□□□ -0
Msh2P43247 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Msh2P43247 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.02■□□□□ -0
Msh2P43247 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.02■□□□□ -0
Msh2P43247 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.02■□□□□ -0
Msh2P43247 AW822252-206ENSMUST00000208904 237 ntBASIC15.02■□□□□ -0
Msh2P43247 Gm5364-201ENSMUST00000216789 889 ntBASIC15.02■□□□□ -0
Msh2P43247 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Msh2P43247 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Matn2-206ENSMUST00000228570 2798 ntBASIC15.02□□□□□ -0.01
Msh2P43247 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.02□□□□□ -0.01
Msh2P43247 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Msh2P43247 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.02□□□□□ -0.01
Msh2P43247 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Msh2P43247 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Msh2P43247 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Msh2P43247 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Msh2P43247 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.01□□□□□ -0.01
Msh2P43247 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Msh2P43247 Gm14140-201ENSMUST00000119999 995 ntBASIC15.01□□□□□ -0.01
Msh2P43247 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.01□□□□□ -0.01
Msh2P43247 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Msh2P43247 Gm10499-201ENSMUST00000174094 934 ntBASIC15.01□□□□□ -0.01
Msh2P43247 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Msh2P43247 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Msh2P43247 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.01□□□□□ -0.01
Msh2P43247 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Msh2P43247 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.01□□□□□ -0.01
Msh2P43247 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Msh2P43247 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Msh2P43247 Gm5184-201ENSMUST00000220417 1702 ntBASIC15□□□□□ -0.01
Msh2P43247 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15□□□□□ -0.01
Msh2P43247 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh2P43247 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh2P43247 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Msh2P43247 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms