Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Mmp9P41245 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp9P41245 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.26□□□□□ -0.45
Mmp9P41245 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp9P41245 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.26□□□□□ -0.45
Mmp9P41245 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.25□□□□□ -0.45
Mmp9P41245 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.25□□□□□ -0.45
Mmp9P41245 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.25□□□□□ -0.45
Mmp9P41245 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.25□□□□□ -0.45
Mmp9P41245 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.25□□□□□ -0.45
Mmp9P41245 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.25□□□□□ -0.45
Mmp9P41245 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Mmp9P41245 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Mmp9P41245 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Mmp9P41245 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm11452-201ENSMUST00000122376 690 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.24□□□□□ -0.45
Mmp9P41245 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.24□□□□□ -0.45
Mmp9P41245 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm27459-201ENSMUST00000184860 107 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm37935-201ENSMUST00000192012 982 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Gm18195-201ENSMUST00000207604 706 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm9172-201ENSMUST00000212092 954 ntBASIC12.24□□□□□ -0.45
Mmp9P41245 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Mmp9P41245 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Mmp9P41245 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms