Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TfamP40630 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TfamP40630 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.13□□□□□ -0.15
TfamP40630 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
TfamP40630 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TfamP40630 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
TfamP40630 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.13□□□□□ -0.15
TfamP40630 Gm18195-201ENSMUST00000207604 706 ntBASIC14.13□□□□□ -0.15
TfamP40630 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TfamP40630 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TfamP40630 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.13□□□□□ -0.15
TfamP40630 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TfamP40630 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.13□□□□□ -0.15
TfamP40630 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
TfamP40630 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.12□□□□□ -0.15
TfamP40630 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TfamP40630 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.12□□□□□ -0.15
TfamP40630 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.12□□□□□ -0.15
TfamP40630 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TfamP40630 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.12□□□□□ -0.15
TfamP40630 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.12□□□□□ -0.15
TfamP40630 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.12□□□□□ -0.15
TfamP40630 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TfamP40630 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.12□□□□□ -0.15
TfamP40630 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TfamP40630 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TfamP40630 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TfamP40630 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.11□□□□□ -0.15
TfamP40630 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
TfamP40630 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.11□□□□□ -0.15
TfamP40630 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TfamP40630 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.11□□□□□ -0.15
TfamP40630 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TfamP40630 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TfamP40630 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
TfamP40630 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
TfamP40630 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.11□□□□□ -0.15
TfamP40630 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.11□□□□□ -0.15
TfamP40630 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.11□□□□□ -0.15
TfamP40630 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.11□□□□□ -0.15
TfamP40630 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TfamP40630 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TfamP40630 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.11□□□□□ -0.15
TfamP40630 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TfamP40630 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TfamP40630 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TfamP40630 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms